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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs3766332 chr1:79001994 A/T GAGE12J chrX:49178536-49185863:+ 0.65 7.23 1.22E-10 Box Plot
THYM rs3800302 chr6:26597333 A/G ZNF322B chr9:99957633-99961910:- 0.76 7.52 3.11E-11 Box Plot
THYM rs3807029 chr6:26595446 T/C ZNF322B chr9:99957633-99961910:- 0.76 7.52 3.11E-11 Box Plot
THYM rs3846271 chr4:171076393 A/T C10orf25 chr10:45493146-45496336:- 1.03 7.3 8.77E-11 Box Plot
THYM rs3887098 chr6:170620035 G/C BANP chr16:87982850-88110924:+ 1.39 7.21 1.34E-10 Box Plot
THYM rs3999476 chr6:26618276 G/A ZNF322B chr9:99957633-99961910:- 0.75 7.76 9.54E-12 Box Plot
THYM rs4044687 chr5:176596941 CAT/C LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs415430 chr17:44859144 C/T LOC644172 chr17:43677491-43679748:- -1.07 -11.07 8.83E-19 Box Plot
THYM rs415430 chr17:44859144 C/T LRRC37A4 chr17:43578685-43595516:- 0.56 8.92 3.29E-14 Box Plot
THYM rs4299827 chr6:26590249 G/A ZNF322B chr9:99957633-99961910:- 0.76 7.52 3.11E-11 Box Plot
THYM rs430685 chr17:44859148 T/C LOC644172 chr17:43677491-43679748:- -1.07 -11.07 8.83E-19 Box Plot
THYM rs430685 chr17:44859148 T/C LRRC37A4 chr17:43578685-43595516:- 0.56 8.92 3.29E-14 Box Plot
THYM rs4556516 chr11:19642909 C/T TFF2 chr21:43766466-43771237:- -0.7 -7.21 1.34E-10 Box Plot
THYM rs4591839 chr6:26597924 C/T ZNF322B chr9:99957633-99961910:- 0.76 7.52 3.11E-11 Box Plot
THYM rs4631 chr5:176733116 A/G LOC388955 chr2:63849182-63850159:- 0.82 11.63 5.87E-20 Box Plot